K-Surfer

K-Surfer is a novel and unique software plugin for KNIME for the management and analysis of FreeSurfer brain dMRI data. K-Surfer consists of a suite of KNIME nodes that perform several tasks, such as importing diffusion data generated from TRACULA, importing morphological measures obtained from the segmentation and reconstruction of neuroimages and visualising the probability distribution of white matter pathways.

For installation guide read the pdf inside the zip.

References:
Sarica Alessia, Giuseppe Di Fatta, and Mario Cannataro. "K-Surfer: A KNIME Extension for the Management and Analysis of Human Brain MRI FreeSurfer/FSL Data." Brain Informatics and Health. Springer International Publishing, 2014. 481-492.

Sarica A, Di Fatta G and Cannataro M (2014). K-Surfer: A KNIME-based tool for the management and analysis of human brain MRI FreeSurfer/FSL Data. Front. Neuroinform. Conference Abstract: Neuroinformatics 2014. doi: 10.3389/conf.fninf.2014.18.00003

Project Samples

(a) Option tab and (b) Tract and Attributes tab of FSDDIoverall node configuration panel

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License

Creative Commons Attribution Non-Commercial License V2.0

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K-Surfer Web Site

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Additional Project Details

Operating Systems

Linux, Mac

Intended Audience

End Users/Desktop, Engineering

User Interface

Eclipse

Programming Language

Java

Related Categories

Java User Interface (UI) Software, Java Design Software

Registered

2014-01-15

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